doi.bio/andriy_kryshtafovych

Andriy Kryshtafovych

Overview

Andriy Kryshtafovych is a researcher and faculty member at the University of California, Davis, in the United States. His primary fields of study include CASP (Critical Assessment of Structure Prediction), protein structure prediction, data mining, artificial intelligence, and machine learning. Kryshtafovych's research interests span a wide range of topics, including structural biology, computational biology, deep learning, and cryo-electron microscopy.

Education and Career

Andriy Kryshtafovych is a Project Scientist at the Genome Center, University of California, Davis. His professional activities include protein structure prediction, analysis, and classification, as well as the evaluation and development of various methods for modelling and predicting protein structures.

Selected Publications and Works

Andriy Kryshtafovych has authored and co-authored numerous publications in prestigious journals, including:

• Critical assessment of methods of protein structure prediction (CASP) – round XV (2023)
• The impact of AI-based modelling on the accuracy of protein assembly prediction: Insights from CASP15 (2023)
• Breaking the conformational ensemble barrier: Ensemble structure modelling challenges in CASP15 (2023)
• Critical assessment of methods of protein structure prediction (CASP) – round XIV (2021)
• Computational models in the service of X-ray and cryo-electron microscopy structure determination (2021)
• Modelling SARS-CoV-2 proteins in the CASP-commons experiment (2021)
• Cryo-EM model validation recommendations based on outcomes of the 2019 EMDataResource challenge (2021)
• Critical assessment of methods of protein structure prediction-Round VII (2007)
• Critical assessment of methods of protein structure prediction: Progress and new directions in round XI (2016)
• Progress over the first decade of CASP experiments (2005)

Co-authors

Kryshtafovych has collaborated with many notable researchers, including John Moult, Krzysztof Fidelis, Torsten Schwede, Burkhard Rost, Bohdan Monastyrskyy, and Anna Tramontano, among others.

Andriy Kryshtafovych

Overview

Andriy Kryshtafovych is a researcher and faculty member at the University of California, Davis, in the United States. His primary fields of study include CASP, Protein structure prediction, Data mining, Artificial Intelligence, and Machine Learning.

Education and Career

Kryshtafovych is a Project Scientist at the Genome Center, University of California, Davis. His professional activities include protein structure prediction, analysis, and classification, as well as the evaluation and validation of various modelling methods.

Research Focus

Kryshtafovych's research interests lie in the following areas:

• Critical assessment of methods for protein structure prediction (CASP)
• Data mining, with a focus on Sequence Identity, Reliability, and Template-based issues
• Artificial Intelligence, including topics such as Field, Data Science, and LiveBench
• Machine Learning, particularly Deep Learning, and its connections to Co-variation
• Computational Biology, Structural Biology, and Cryo-electron microscopy

Publications

Kryshtafovych has numerous publications, with his most cited works including:

• "Critical assessment of methods of protein structure prediction (CASP) — round x" (1283 citations)
• "Critical assessment of methods of protein structure prediction-Round VII" (291 citations)
• "Critical assessment of methods of protein structure prediction (CASP) - round x: Critical Assessment of Structure Prediction" (234 citations)
• "Critical assessment of methods of protein structure prediction (CASP) - round XV" (published in 2023)
• "The impact of AI-based modeling on the accuracy of protein assembly prediction: Insights from CASP15" (published in 2023)
• "Breaking the conformational ensemble barrier: Ensemble structure modeling challenges in CASP15" (published in 2023)
• "Computational models in the service of X-ray and cryo-electron microscopy structure determination" (published in 2021)

Co-Authors

Kryshtafovych has co-authored papers with the following researchers:

• John Moult
• Krzysztof Fidelis
• Torsten Schwede
• Burkhard Rost
• Bohdan Monastyrskyy
• Anna Tramontano

- and others

Andriy Kryshtafovych

Overview

Andriy Kryshtafovych is a researcher and scientist in the fields of artificial intelligence, machine learning, and biochemistry. His work focuses on protein structure prediction, data mining, and computational biology. He is currently based at the University of California, Davis, in the United States.

Education and Career

• Project Scientist, Genome Center, University of California, Davis: Kryshtafovych's research focuses on protein structure prediction, analysis, and classification. He also works on the evaluation of protein models and the development of methods for template-based modeling, free modeling, refinement, and data-assisted modeling.
• Previous Positions: Kryshtafovych has previously held positions at the University of Maryland, College Park; Sapienza University of Rome; Argonne National Laboratory; Lawrence Berkeley National Laboratory; and the University of Texas Southwestern Medical Center.

Selected Publications and Works

Andriy Kryshtafovych has an extensive list of publications, with his most cited works including:

• Critical Assessment of Methods of Protein Structure Prediction (CASP) Rounds: These are a series of critical assessments of methods for protein structure prediction, with a focus on interdisciplinary approaches. The CASP rounds vary in their specific focus and the number of citations they have received.
• Petascale Homology Search for Structure Prediction: This publication, co-authored with several other researchers, was published in Cold Spring Harb Perspect Biol in 2024.
• The Impact of AI-Based Modeling on the Accuracy of Protein Assembly Prediction: Insights from CASP15: Published in Proteins in 2023, this work explores the impact of AI-based modeling on protein assembly prediction accuracy.
• Breaking the Conformational Ensemble Barrier: Ensemble Structure Modeling Challenges in CASP15: Another 2023 publication in Proteins, this work delves into the challenges of ensemble structure modeling in CASP15.
• Computational Models in the Service of X-ray and Cryo-Electron Microscopy Structure Determination: This work, published in Proteins in 2021, explores the role of computational models in X-ray and cryo-electron microscopy structure determination.
• Modeling SARS-CoV-2 Proteins in the CASP-Commons Experiment: A 2021 publication in Proteins that focuses on modeling SARS-CoV-2 proteins.
• Cryo-EM Model Validation Recommendations: This work, published in Nature Methods in 2021, provides recommendations for cryo-EM model validation based on the outcomes of the 2019 EMDataResource challenge.

Research Interests and Themes

Kryshtafovych's research interests span a wide range of fields, including:

• CASP (Critical Assessment of Protein Structure Prediction): His work in this field is interdisciplinary, drawing from cluster analysis, range, ranking, algorithms, and intrinsically disordered proteins.
• Protein Structure Prediction: This includes topics such as structural biology, computational biology, protein folding, and data mining.
• Data Mining: He interconnects sequence identity, reliability, and template-based approaches, often linking them to artificial intelligence and machine learning.
• Artificial Intelligence and Machine Learning: His work in these fields intersects with correctness, workflow, co-variation, context, structure, and deep learning.
• Biological Studies: Kryshtafovych's biological research covers sequence identity, genetics, homology modeling, and protein tertiary and secondary structure.

Co-Authors

Andriy Kryshtafovych has collaborated with numerous researchers on his publications, including:

• John Moult
• Krzysztof Fidelis
• Torsten Schwede
• Burkhard Rost
• Bohdan Monastyrskyy
• Anna Tramontano
• Joerg Schaarschmidt
• Alexandre M.J.J. Bonvin

Google Scholar Profile

Andriy Kryshtafovych)

Google Scholar

Andriy Kryshtafovych University of California, Davis N/A Critical assessment of methods of protein structure prediction (CASP)—Round XIII A Kryshtafovych, T Schwede, M Topf, K Fidelis, J Moult Proteins: Structure, Function, and Bioinformatics 87 (12), 1011-1020, 2019 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:08ZZubdj9fEC Cited by: 509

Critical assessment of methods of protein structure prediction (CASP)—round x J Moult, K Fidelis, A Kryshtafovych, T Schwede, A Tramontano Proteins: Structure, Function, and Bioinformatics 82, 1-6, 2014 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:iH-uZ7U-co4C Cited by: 489

Critical assessment of methods of protein structure prediction (CASP)—Round XII J Moult, K Fidelis, A Kryshtafovych, T Schwede, A Tramontano Proteins: Structure, Function, and Bioinformatics 86, 7-15, 2018 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:EUQCXRtRnyEC Cited by: 375

Critical assessment of methods of protein structure prediction (CASP)—Round XIV A Kryshtafovych, T Schwede, M Topf, K Fidelis, J Moult Proteins: Structure, Function, and Bioinformatics 89 (12), 1607-1617, 2021 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:Y5dfb0dijaUC Cited by: 369

Critical assessment of methods of protein structure prediction—Round VII J Moult, K Fidelis, A Kryshtafovych, B Rost, T Hubbard, A Tramontano Proteins: Structure, Function, and Bioinformatics 69 (S8), 3-9, 2007 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:u5HHmVD_uO8C Cited by: 294

Critical assessment of methods of protein structure prediction (CASP)—round IX J Moult, K Fidelis, A Kryshtafovych, A Tramontano Proteins: Structure, Function, and Bioinformatics 79 (S10), 1-5, 2011 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:2osOgNQ5qMEC Cited by: 274

Critical assessment of methods of protein structure prediction: Progress and new directions in round XI J Moult, K Fidelis, A Kryshtafovych, T Schwede, A Tramontano Proteins: Structure, Function, and Bioinformatics 84, 4-14, 2016 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:d1gkVwhDpl0C Cited by: 272

Critical assessment of methods of protein structure prediction—Round VIII J Moult, K Fidelis, A Kryshtafovych, B Rost, A Tramontano Proteins: Structure, Function, and Bioinformatics 77 (S9), 1-4, 2009 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:zA6iFVUQeVQC Cited by: 255

Progress over the first decade of CASP experiments A Kryshtafovych, Č Venclovas, K Fidelis, J Moult PROTEINS: structure, function, and bioinformatics 61 (S7), 225-236, 2005 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:u-x6o8ySG0sC Cited by: 234

Assessment of contact predictions in CASP12: co‐evolution and deep learning coming of age J Schaarschmidt, B Monastyrskyy, A Kryshtafovych, AMJJ Bonvin Proteins: Structure, Function, and Bioinformatics 86, 51-66, 2018 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:D03iK_w7-QYC Cited by: 226

Assessment of protein disorder region predictions in CASP10 B Monastyrskyy, A Kryshtafovych, J Moult, A Tramontano, K Fidelis Proteins: Structure, Function, and Bioinformatics 82, 127-137, 2014 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:R3hNpaxXUhUC Cited by: 178

Prediction of homoprotein and heteroprotein complexes by protein docking and template‐based modeling: a CASP‐CAPRI experiment MF Lensink, S Velankar, A Kryshtafovych, SY Huang, … Proteins: Structure, Function, and Bioinformatics 84, 323-348, 2016 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:lSLTfruPkqcC Cited by: 168

Assessment of the assessment: evaluation of the model quality estimates in CASP10 A Kryshtafovych, A Barbato, K Fidelis, B Monastyrskyy, T Schwede, … Proteins: Structure, Function, and Bioinformatics 82, 112-126, 2014 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:Wp0gIr-vW9MC Cited by: 166

Evaluation of template‐based models in CASP8 with standard measures D Cozzetto, A Kryshtafovych, K Fidelis, J Moult, B Rost, A Tramontano Proteins: Structure, Function, and Bioinformatics 77 (S9), 18-28, 2009 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:qjMakFHDy7sC Cited by: 162

Outcome of a workshop on applications of protein models in biomedical research T Schwede, A Sali, B Honig, M Levitt, HM Berman, D Jones, SE Brenner, … Structure 17 (2), 151-159, 2009 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:zYLM7Y9cAGgC Cited by: 155

Assessment of predictions in the model quality assessment category D Cozzetto, A Kryshtafovych, M Ceriani, A Tramontano Proteins: Structure, Function, and Bioinformatics 69 (S8), 175-183, 2007 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:9yKSN-GCB0IC Cited by: 143

Evaluation of disorder predictions in CASP9 B Monastyrskyy, K Fidelis, J Moult, A Tramontano, A Kryshtafovych Proteins: Structure, Function, and Bioinformatics 79 (S10), 107-118, 2011 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:_FxGoFyzp5QC Cited by: 134

Protein structure prediction and model quality assessment A Kryshtafovych, K Fidelis Drug discovery today 14 (7-8), 386-393, 2009 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:IjCSPb-OGe4C Cited by: 131

CASP10 results compared to those of previous CASP experiments A Kryshtafovych, K Fidelis, J Moult Proteins: Structure, Function, and Bioinformatics 82, 164-174, 2014 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:4JMBOYKVnBMC Cited by: 128

New encouraging developments in contact prediction: Assessment of the CASP 11 results B Monastyrskyy, D D'Andrea, K Fidelis, A Tramontano, A Kryshtafovych Proteins: Structure, Function, and Bioinformatics 84, 131-144, 2016 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:NMxIlDl6LWMC Cited by: 118

Co-authors

Anna Tramontano HecX1PUAAAAJ

Torgeir R. Hvidsten rMkIGowAAAAJ

Burkhard Rost BP3ofxcAAAAJ

Domenico Cozzetto 0XW5e6QAAAAJ

Česlovas Venclovas wBKBzVoAAAAJ

Tim Hubbard LvkRz3UAAAAJ

Google Scholar

Andriy Kryshtafovych University of California, Davis N/A Critical assessment of methods of protein structure prediction (CASP)—Round XIII A Kryshtafovych, T Schwede, M Topf, K Fidelis, J Moult Proteins: Structure, Function, and Bioinformatics 87 (12), 1011-1020, 2019 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:08ZZubdj9fEC Cited by: 509

Critical assessment of methods of protein structure prediction (CASP)—round x J Moult, K Fidelis, A Kryshtafovych, T Schwede, A Tramontano Proteins: Structure, Function, and Bioinformatics 82, 1-6, 2014 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:iH-uZ7U-co4C Cited by: 489

Critical assessment of methods of protein structure prediction (CASP)—Round XII J Moult, K Fidelis, A Kryshtafovych, T Schwede, A Tramontano Proteins: Structure, Function, and Bioinformatics 86, 7-15, 2018 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:EUQCXRtRnyEC Cited by: 375

Critical assessment of methods of protein structure prediction (CASP)—Round XIV A Kryshtafovych, T Schwede, M Topf, K Fidelis, J Moult Proteins: Structure, Function, and Bioinformatics 89 (12), 1607-1617, 2021 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:Y5dfb0dijaUC Cited by: 369

Critical assessment of methods of protein structure prediction—Round VII J Moult, K Fidelis, A Kryshtafovych, B Rost, T Hubbard, A Tramontano Proteins: Structure, Function, and Bioinformatics 69 (S8), 3-9, 2007 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:u5HHmVD_uO8C Cited by: 294

Critical assessment of methods of protein structure prediction (CASP)—round IX J Moult, K Fidelis, A Kryshtafovych, A Tramontano Proteins: Structure, Function, and Bioinformatics 79 (S10), 1-5, 2011 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:2osOgNQ5qMEC Cited by: 274

Critical assessment of methods of protein structure prediction: Progress and new directions in round XI J Moult, K Fidelis, A Kryshtafovych, T Schwede, A Tramontano Proteins: Structure, Function, and Bioinformatics 84, 4-14, 2016 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:d1gkVwhDpl0C Cited by: 272

Critical assessment of methods of protein structure prediction—Round VIII J Moult, K Fidelis, A Kryshtafovych, B Rost, A Tramontano Proteins: Structure, Function, and Bioinformatics 77 (S9), 1-4, 2009 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:zA6iFVUQeVQC Cited by: 255

Progress over the first decade of CASP experiments A Kryshtafovych, Č Venclovas, K Fidelis, J Moult PROTEINS: structure, function, and bioinformatics 61 (S7), 225-236, 2005 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:u-x6o8ySG0sC Cited by: 234

Assessment of contact predictions in CASP12: co‐evolution and deep learning coming of age J Schaarschmidt, B Monastyrskyy, A Kryshtafovych, AMJJ Bonvin Proteins: Structure, Function, and Bioinformatics 86, 51-66, 2018 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:D03iK_w7-QYC Cited by: 226

Assessment of protein disorder region predictions in CASP10 B Monastyrskyy, A Kryshtafovych, J Moult, A Tramontano, K Fidelis Proteins: Structure, Function, and Bioinformatics 82, 127-137, 2014 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:R3hNpaxXUhUC Cited by: 178

Prediction of homoprotein and heteroprotein complexes by protein docking and template‐based modeling: a CASP‐CAPRI experiment MF Lensink, S Velankar, A Kryshtafovych, SY Huang, … Proteins: Structure, Function, and Bioinformatics 84, 323-348, 2016 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:lSLTfruPkqcC Cited by: 168

Assessment of the assessment: evaluation of the model quality estimates in CASP10 A Kryshtafovych, A Barbato, K Fidelis, B Monastyrskyy, T Schwede, … Proteins: Structure, Function, and Bioinformatics 82, 112-126, 2014 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:Wp0gIr-vW9MC Cited by: 166

Evaluation of template‐based models in CASP8 with standard measures D Cozzetto, A Kryshtafovych, K Fidelis, J Moult, B Rost, A Tramontano Proteins: Structure, Function, and Bioinformatics 77 (S9), 18-28, 2009 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:qjMakFHDy7sC Cited by: 162

Outcome of a workshop on applications of protein models in biomedical research T Schwede, A Sali, B Honig, M Levitt, HM Berman, D Jones, SE Brenner, … Structure 17 (2), 151-159, 2009 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:zYLM7Y9cAGgC Cited by: 155

Assessment of predictions in the model quality assessment category D Cozzetto, A Kryshtafovych, M Ceriani, A Tramontano Proteins: Structure, Function, and Bioinformatics 69 (S8), 175-183, 2007 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:9yKSN-GCB0IC Cited by: 143

Evaluation of disorder predictions in CASP9 B Monastyrskyy, K Fidelis, J Moult, A Tramontano, A Kryshtafovych Proteins: Structure, Function, and Bioinformatics 79 (S10), 107-118, 2011 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:_FxGoFyzp5QC Cited by: 134

Protein structure prediction and model quality assessment A Kryshtafovych, K Fidelis Drug discovery today 14 (7-8), 386-393, 2009 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:IjCSPb-OGe4C Cited by: 131

CASP10 results compared to those of previous CASP experiments A Kryshtafovych, K Fidelis, J Moult Proteins: Structure, Function, and Bioinformatics 82, 164-174, 2014 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:4JMBOYKVnBMC Cited by: 128

New encouraging developments in contact prediction: Assessment of the CASP 11 results B Monastyrskyy, D D'Andrea, K Fidelis, A Tramontano, A Kryshtafovych Proteins: Structure, Function, and Bioinformatics 84, 131-144, 2016 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:NMxIlDl6LWMC Cited by: 118

Co-authors

Anna Tramontano googlescholarauthor_id:HecX1PUAAAAJ

Torgeir R. Hvidsten googlescholarauthor_id:rMkIGowAAAAJ

Burkhard Rost googlescholarauthor_id:BP3ofxcAAAAJ

Domenico Cozzetto googlescholarauthor_id:0XW5e6QAAAAJ

Česlovas Venclovas googlescholarauthor_id:wBKBzVoAAAAJ

Tim Hubbard googlescholarauthor_id:LvkRz3UAAAAJ

Google Scholar

Andriy Kryshtafovych University of California, Davis N/A Critical assessment of methods of protein structure prediction (CASP)—Round XIII A Kryshtafovych, T Schwede, M Topf, K Fidelis, J Moult Proteins: Structure, Function, and Bioinformatics 87 (12), 1011-1020, 2019 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:08ZZubdj9fEC Cited by: 509

Critical assessment of methods of protein structure prediction (CASP)—round x J Moult, K Fidelis, A Kryshtafovych, T Schwede, A Tramontano Proteins: Structure, Function, and Bioinformatics 82, 1-6, 2014 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:iH-uZ7U-co4C Cited by: 489

Critical assessment of methods of protein structure prediction (CASP)—Round XII J Moult, K Fidelis, A Kryshtafovych, T Schwede, A Tramontano Proteins: Structure, Function, and Bioinformatics 86, 7-15, 2018 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:EUQCXRtRnyEC Cited by: 375

Critical assessment of methods of protein structure prediction (CASP)—Round XIV A Kryshtafovych, T Schwede, M Topf, K Fidelis, J Moult Proteins: Structure, Function, and Bioinformatics 89 (12), 1607-1617, 2021 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:Y5dfb0dijaUC Cited by: 369

Critical assessment of methods of protein structure prediction—Round VII J Moult, K Fidelis, A Kryshtafovych, B Rost, T Hubbard, A Tramontano Proteins: Structure, Function, and Bioinformatics 69 (S8), 3-9, 2007 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:u5HHmVD_uO8C Cited by: 294

Critical assessment of methods of protein structure prediction (CASP)—round IX J Moult, K Fidelis, A Kryshtafovych, A Tramontano Proteins: Structure, Function, and Bioinformatics 79 (S10), 1-5, 2011 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:2osOgNQ5qMEC Cited by: 274

Critical assessment of methods of protein structure prediction: Progress and new directions in round XI J Moult, K Fidelis, A Kryshtafovych, T Schwede, A Tramontano Proteins: Structure, Function, and Bioinformatics 84, 4-14, 2016 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:d1gkVwhDpl0C Cited by: 272

Critical assessment of methods of protein structure prediction—Round VIII J Moult, K Fidelis, A Kryshtafovych, B Rost, A Tramontano Proteins: Structure, Function, and Bioinformatics 77 (S9), 1-4, 2009 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:zA6iFVUQeVQC Cited by: 255

Progress over the first decade of CASP experiments A Kryshtafovych, Č Venclovas, K Fidelis, J Moult PROTEINS: structure, function, and bioinformatics 61 (S7), 225-236, 2005 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:u-x6o8ySG0sC Cited by: 234

Assessment of contact predictions in CASP12: co‐evolution and deep learning coming of age J Schaarschmidt, B Monastyrskyy, A Kryshtafovych, AMJJ Bonvin Proteins: Structure, Function, and Bioinformatics 86, 51-66, 2018 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:D03iK_w7-QYC Cited by: 226

Assessment of protein disorder region predictions in CASP10 B Monastyrskyy, A Kryshtafovych, J Moult, A Tramontano, K Fidelis Proteins: Structure, Function, and Bioinformatics 82, 127-137, 2014 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:R3hNpaxXUhUC Cited by: 178

Prediction of homoprotein and heteroprotein complexes by protein docking and template‐based modeling: a CASP‐CAPRI experiment MF Lensink, S Velankar, A Kryshtafovych, SY Huang, … Proteins: Structure, Function, and Bioinformatics 84, 323-348, 2016 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:lSLTfruPkqcC Cited by: 168

Assessment of the assessment: evaluation of the model quality estimates in CASP10 A Kryshtafovych, A Barbato, K Fidelis, B Monastyrskyy, T Schwede, … Proteins: Structure, Function, and Bioinformatics 82, 112-126, 2014 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:Wp0gIr-vW9MC Cited by: 166

Evaluation of template‐based models in CASP8 with standard measures D Cozzetto, A Kryshtafovych, K Fidelis, J Moult, B Rost, A Tramontano Proteins: Structure, Function, and Bioinformatics 77 (S9), 18-28, 2009 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:qjMakFHDy7sC Cited by: 162

Outcome of a workshop on applications of protein models in biomedical research T Schwede, A Sali, B Honig, M Levitt, HM Berman, D Jones, SE Brenner, … Structure 17 (2), 151-159, 2009 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:zYLM7Y9cAGgC Cited by: 155

Assessment of predictions in the model quality assessment category D Cozzetto, A Kryshtafovych, M Ceriani, A Tramontano Proteins: Structure, Function, and Bioinformatics 69 (S8), 175-183, 2007 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:9yKSN-GCB0IC Cited by: 143

Evaluation of disorder predictions in CASP9 B Monastyrskyy, K Fidelis, J Moult, A Tramontano, A Kryshtafovych Proteins: Structure, Function, and Bioinformatics 79 (S10), 107-118, 2011 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:_FxGoFyzp5QC Cited by: 134

Protein structure prediction and model quality assessment A Kryshtafovych, K Fidelis Drug discovery today 14 (7-8), 386-393, 2009 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:IjCSPb-OGe4C Cited by: 131

CASP10 results compared to those of previous CASP experiments A Kryshtafovych, K Fidelis, J Moult Proteins: Structure, Function, and Bioinformatics 82, 164-174, 2014 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:4JMBOYKVnBMC Cited by: 128

New encouraging developments in contact prediction: Assessment of the CASP 11 results B Monastyrskyy, D D'Andrea, K Fidelis, A Tramontano, A Kryshtafovych Proteins: Structure, Function, and Bioinformatics 84, 131-144, 2016 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:NMxIlDl6LWMC Cited by: 118

Co-authors

Anna Tramontano googlescholarauthorid:[annatramontano.md][HecX1PUAAAAJ]

Torgeir R. Hvidsten googlescholarauthorid:[torgeirr._hvidsten.md][rMkIGowAAAAJ]

Burkhard Rost googlescholarauthorid:[burkhardrost.md][BP3ofxcAAAAJ]

Domenico Cozzetto googlescholarauthorid:[domenicocozzetto.md][0XW5e6QAAAAJ]

Česlovas Venclovas googlescholarauthorid:[česlovasvenclovas.md][wBKBzVoAAAAJ]

Tim Hubbard googlescholarauthorid:[timhubbard.md][LvkRz3UAAAAJ]

Google Scholar

Andriy Kryshtafovych University of California, Davis N/A Critical assessment of methods of protein structure prediction (CASP)—Round XIII A Kryshtafovych, T Schwede, M Topf, K Fidelis, J Moult Proteins: Structure, Function, and Bioinformatics 87 (12), 1011-1020, 2019 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:08ZZubdj9fEC Cited by: 509

Critical assessment of methods of protein structure prediction (CASP)—round x J Moult, K Fidelis, A Kryshtafovych, T Schwede, A Tramontano Proteins: Structure, Function, and Bioinformatics 82, 1-6, 2014 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:iH-uZ7U-co4C Cited by: 489

Critical assessment of methods of protein structure prediction (CASP)—Round XII J Moult, K Fidelis, A Kryshtafovych, T Schwede, A Tramontano Proteins: Structure, Function, and Bioinformatics 86, 7-15, 2018 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:EUQCXRtRnyEC Cited by: 375

Critical assessment of methods of protein structure prediction (CASP)—Round XIV A Kryshtafovych, T Schwede, M Topf, K Fidelis, J Moult Proteins: Structure, Function, and Bioinformatics 89 (12), 1607-1617, 2021 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:Y5dfb0dijaUC Cited by: 369

Critical assessment of methods of protein structure prediction—Round VII J Moult, K Fidelis, A Kryshtafovych, B Rost, T Hubbard, A Tramontano Proteins: Structure, Function, and Bioinformatics 69 (S8), 3-9, 2007 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:u5HHmVD_uO8C Cited by: 294

Critical assessment of methods of protein structure prediction (CASP)—round IX J Moult, K Fidelis, A Kryshtafovych, A Tramontano Proteins: Structure, Function, and Bioinformatics 79 (S10), 1-5, 2011 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:2osOgNQ5qMEC Cited by: 274

Critical assessment of methods of protein structure prediction: Progress and new directions in round XI J Moult, K Fidelis, A Kryshtafovych, T Schwede, A Tramontano Proteins: Structure, Function, and Bioinformatics 84, 4-14, 2016 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:d1gkVwhDpl0C Cited by: 272

Critical assessment of methods of protein structure prediction—Round VIII J Moult, K Fidelis, A Kryshtafovych, B Rost, A Tramontano Proteins: Structure, Function, and Bioinformatics 77 (S9), 1-4, 2009 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:zA6iFVUQeVQC Cited by: 255

Progress over the first decade of CASP experiments A Kryshtafovych, Č Venclovas, K Fidelis, J Moult PROTEINS: structure, function, and bioinformatics 61 (S7), 225-236, 2005 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:u-x6o8ySG0sC Cited by: 234

Assessment of contact predictions in CASP12: co‐evolution and deep learning coming of age J Schaarschmidt, B Monastyrskyy, A Kryshtafovych, AMJJ Bonvin Proteins: Structure, Function, and Bioinformatics 86, 51-66, 2018 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:D03iK_w7-QYC Cited by: 226

Assessment of protein disorder region predictions in CASP10 B Monastyrskyy, A Kryshtafovych, J Moult, A Tramontano, K Fidelis Proteins: Structure, Function, and Bioinformatics 82, 127-137, 2014 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:R3hNpaxXUhUC Cited by: 178

Prediction of homoprotein and heteroprotein complexes by protein docking and template‐based modeling: a CASP‐CAPRI experiment MF Lensink, S Velankar, A Kryshtafovych, SY Huang, … Proteins: Structure, Function, and Bioinformatics 84, 323-348, 2016 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:lSLTfruPkqcC Cited by: 168

Assessment of the assessment: evaluation of the model quality estimates in CASP10 A Kryshtafovych, A Barbato, K Fidelis, B Monastyrskyy, T Schwede, … Proteins: Structure, Function, and Bioinformatics 82, 112-126, 2014 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:Wp0gIr-vW9MC Cited by: 166

Evaluation of template‐based models in CASP8 with standard measures D Cozzetto, A Kryshtafovych, K Fidelis, J Moult, B Rost, A Tramontano Proteins: Structure, Function, and Bioinformatics 77 (S9), 18-28, 2009 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:qjMakFHDy7sC Cited by: 162

Outcome of a workshop on applications of protein models in biomedical research T Schwede, A Sali, B Honig, M Levitt, HM Berman, D Jones, SE Brenner, … Structure 17 (2), 151-159, 2009 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:zYLM7Y9cAGgC Cited by: 155

Assessment of predictions in the model quality assessment category D Cozzetto, A Kryshtafovych, M Ceriani, A Tramontano Proteins: Structure, Function, and Bioinformatics 69 (S8), 175-183, 2007 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:9yKSN-GCB0IC Cited by: 143

Evaluation of disorder predictions in CASP9 B Monastyrskyy, K Fidelis, J Moult, A Tramontano, A Kryshtafovych Proteins: Structure, Function, and Bioinformatics 79 (S10), 107-118, 2011 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:_FxGoFyzp5QC Cited by: 134

Protein structure prediction and model quality assessment A Kryshtafovych, K Fidelis Drug discovery today 14 (7-8), 386-393, 2009 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:IjCSPb-OGe4C Cited by: 131

CASP10 results compared to those of previous CASP experiments A Kryshtafovych, K Fidelis, J Moult Proteins: Structure, Function, and Bioinformatics 82, 164-174, 2014 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:4JMBOYKVnBMC Cited by: 128

New encouraging developments in contact prediction: Assessment of the CASP 11 results B Monastyrskyy, D D'Andrea, K Fidelis, A Tramontano, A Kryshtafovych Proteins: Structure, Function, and Bioinformatics 84, 131-144, 2016 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:NMxIlDl6LWMC Cited by: 118

Co-authors

Anna Tramontano googlescholarauthorid annatramontano.md:HecX1PUAAAAJ

Torgeir R. Hvidsten googlescholarauthorid torgeirr._hvidsten.md:rMkIGowAAAAJ

Burkhard Rost googlescholarauthorid burkhardrost.md:BP3ofxcAAAAJ

Domenico Cozzetto googlescholarauthorid domenicocozzetto.md:0XW5e6QAAAAJ

Česlovas Venclovas googlescholarauthorid česlovasvenclovas.md:wBKBzVoAAAAJ

Tim Hubbard googlescholarauthorid timhubbard.md:LvkRz3UAAAAJ

Google Scholar

Andriy Kryshtafovych

University of California, Davis

N/A

Critical assessment of methods of protein structure prediction (CASP)—Round XIII A Kryshtafovych, T Schwede, M Topf, K Fidelis, J Moult Proteins: Structure, Function, and Bioinformatics 87 (12), 1011-1020, 2019 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:08ZZubdj9fEC Cited by: 510

Critical assessment of methods of protein structure prediction (CASP)—round x J Moult, K Fidelis, A Kryshtafovych, T Schwede, A Tramontano Proteins: Structure, Function, and Bioinformatics 82, 1-6, 2014 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:iH-uZ7U-co4C Cited by: 489

Critical assessment of methods of protein structure prediction (CASP)—Round XII J Moult, K Fidelis, A Kryshtafovych, T Schwede, A Tramontano Proteins: Structure, Function, and Bioinformatics 86, 7-15, 2018 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:EUQCXRtRnyEC Cited by: 375

Critical assessment of methods of protein structure prediction (CASP)—Round XIV A Kryshtafovych, T Schwede, M Topf, K Fidelis, J Moult Proteins: Structure, Function, and Bioinformatics 89 (12), 1607-1617, 2021 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:Y5dfb0dijaUC Cited by: 370

Critical assessment of methods of protein structure prediction—Round VII J Moult, K Fidelis, A Kryshtafovych, B Rost, T Hubbard, A Tramontano Proteins: Structure, Function, and Bioinformatics 69 (S8), 3-9, 2007 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:u5HHmVD_uO8C Cited by: 294

Critical assessment of methods of protein structure prediction (CASP)—round IX J Moult, K Fidelis, A Kryshtafovych, A Tramontano Proteins: Structure, Function, and Bioinformatics 79 (S10), 1-5, 2011 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:2osOgNQ5qMEC Cited by: 274

Critical assessment of methods of protein structure prediction: Progress and new directions in round XI J Moult, K Fidelis, A Kryshtafovych, T Schwede, A Tramontano Proteins: Structure, Function, and Bioinformatics 84, 4-14, 2016 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:d1gkVwhDpl0C Cited by: 272

Critical assessment of methods of protein structure prediction—Round VIII J Moult, K Fidelis, A Kryshtafovych, B Rost, A Tramontano Proteins: Structure, Function, and Bioinformatics 77 (S9), 1-4, 2009 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:zA6iFVUQeVQC Cited by: 255

Progress over the first decade of CASP experiments A Kryshtafovych, Č Venclovas, K Fidelis, J Moult PROTEINS: structure, function, and bioinformatics 61 (S7), 225-236, 2005 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:u-x6o8ySG0sC Cited by: 234

Assessment of contact predictions in CASP12: co‐evolution and deep learning coming of age J Schaarschmidt, B Monastyrskyy, A Kryshtafovych, AMJJ Bonvin Proteins: Structure, Function, and Bioinformatics 86, 51-66, 2018 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:D03iK_w7-QYC Cited by: 226

Assessment of protein disorder region predictions in CASP10 B Monastyrskyy, A Kryshtafovych, J Moult, A Tramontano, K Fidelis Proteins: Structure, Function, and Bioinformatics 82, 127-137, 2014 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:R3hNpaxXUhUC Cited by: 178

Prediction of homoprotein and heteroprotein complexes by protein docking and template‐based modeling: a CASP‐CAPRI experiment MF Lensink, S Velankar, A Kryshtafovych, SY Huang, … Proteins: Structure, Function, and Bioinformatics 84, 323-348, 2016 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:lSLTfruPkqcC Cited by: 168

Assessment of the assessment: evaluation of the model quality estimates in CASP10 A Kryshtafovych, A Barbato, K Fidelis, B Monastyrskyy, T Schwede, … Proteins: Structure, Function, and Bioinformatics 82, 112-126, 2014 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:Wp0gIr-vW9MC Cited by: 166

Evaluation of template‐based models in CASP8 with standard measures D Cozzetto, A Kryshtafovych, K Fidelis, J Moult, B Rost, A Tramontano Proteins: Structure, Function, and Bioinformatics 77 (S9), 18-28, 2009 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:qjMakFHDy7sC Cited by: 162

Outcome of a workshop on applications of protein models in biomedical research T Schwede, A Sali, B Honig, M Levitt, HM Berman, D Jones, SE Brenner, … Structure 17 (2), 151-159, 2009 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:zYLM7Y9cAGgC Cited by: 155

Assessment of predictions in the model quality assessment category D Cozzetto, A Kryshtafovych, M Ceriani, A Tramontano Proteins: Structure, Function, and Bioinformatics 69 (S8), 175-183, 2007 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:9yKSN-GCB0IC Cited by: 143

Evaluation of disorder predictions in CASP9 B Monastyrskyy, K Fidelis, J Moult, A Tramontano, A Kryshtafovych Proteins: Structure, Function, and Bioinformatics 79 (S10), 107-118, 2011 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:_FxGoFyzp5QC Cited by: 134

Protein structure prediction and model quality assessment A Kryshtafovych, K Fidelis Drug discovery today 14 (7-8), 386-393, 2009 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:IjCSPb-OGe4C Cited by: 131

CASP10 results compared to those of previous CASP experiments A Kryshtafovych, K Fidelis, J Moult Proteins: Structure, Function, and Bioinformatics 82, 164-174, 2014 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:4JMBOYKVnBMC Cited by: 128

New encouraging developments in contact prediction: Assessment of the CASP 11 results B Monastyrskyy, D D'Andrea, K Fidelis, A Tramontano, A Kryshtafovych Proteins: Structure, Function, and Bioinformatics 84, 131-144, 2016 Link: https://scholar.google.com/citations?viewop=viewcitation&hl=en&user=tZxqbAAAAAJ&citationforview=tZxqbAAAAAJ:NMxIlDl6LWMC Cited by: 118

Co-authors

Anna Tramontano googlescholarauthorid annatramontano.md:HecX1PUAAAAJ

Torgeir R. Hvidsten googlescholarauthorid torgeirr._hvidsten.md:rMkIGowAAAAJ

Burkhard Rost googlescholarauthorid burkhardrost.md:BP3ofxcAAAAJ

Domenico Cozzetto googlescholarauthorid domenicocozzetto.md:0XW5e6QAAAAJ

Česlovas Venclovas googlescholarauthorid česlovasvenclovas.md:wBKBzVoAAAAJ

Tim Hubbard googlescholarauthorid timhubbard.md:LvkRz3UAAAAJ

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